SoftwareResourceOntology Class Hierarchy
Data
Clinical data
Aggregate Human Data
Individual Human Data
Nonhuman Data
Data Management
(7 instances)
Cross-Language Wrapping
Data Storage
Data Transfer
Information retrieval, traversal and querying
Measurement
Image
Molecular Interaction
Phenotypic measurement
Dissemination Vehicle
Education
Course Material
Tutorials
Interactive Web-Based Tool
BugReporting
FeatureRequest
MailingList
Support
Web Posting
News
OnlineCourse
Atomic
Algorithm
AreaOfApplication
BasicResearch
ClinicalResearch
TranslationalResearch
AssociatedURL
BiologicalConcept
DNA
Gene
Genome
Interaction
Phenotype
Protein
Transcript
DataTypology
Alignment
AnthologyClass
BiologicalSequence
InstrumentMeasurement
Structure
Document
Ontology
Publication
Paper
Software/Technology Protocol
White Paper
Software documentation
Input
Integration and Interoperability Tools
Graphical Processing Workflow Environments
Output
Purpose
SoftwareFunction
Computational Geometry
Feature Analysis
Pattern Recognition
Shape Analysis
Genomic & Phenotypic Analysis
Network characterization
Regulatory/Signaling network reconstruction
(1 instance)
Sequence Annotation
Sequence Similarity Searching
Image Processing
(2 instances)
Atlas Generation
Cortical Modeling
EDA
Pre-Processing
Data Transforms
Spectral Transforms
Fourier Transform
Wavelet Transform
Filtering
Inhomogeneity Correction
Skull Stripping
Registration
(2 instances)
Segmentation
(1 instance)
Interaction Modeling
Protein interaction modeling
Simulation
Mechanical Simulation
ContactModeling
Controllers
Meshing
MolecularForceFieldCalculator
MultibodyDynamics
Random Number Simulation
Natural Language Processing
Numerical Methods
ComputationalGeometry
LinearAlgebraTools
MonteCarloSimulation
NumericalIntegrators
Optimizers
PDESolvers
RootFinders
Protein Modeling and Classification
Calculation of Solvent Accessible Area
Homology Modeling
Molecular Visualization Package
Numerical Calculation of Electrostatic Potential
Prediction of Side-chain Conformations
Structure-based protein classification
Software Engineering and Development Tool
Cross-LanguageWrapping
(1 instance)
Cross-Platform Tools
(2 instances)
Document Generation
Integration
Graphical e.g., HIVE Pipeline
(1 instance)
Grid Computing Resources
Mappers e.g., BrainGraph BrainMapper
Portals
Resource Integration Components
(1 instance)
Ontology Development and Management
Data Annotation
Ontology Development
Ontology Diff and Alignment
(1 instance)
Ontology Visualization
Programmatic Access
Web Access
Source Control
Testing Tools
(2 instances)
Statistical Analysis
Statistical Package
Visualization
Clinical Charts e.g., Demographics
Graph Viewers
Hyperbolic Graphs
Hierarchical Trees
Imaging
Cross-Sectional Viewers
Manifold Viewers 2D, 3D, 4D, ND
(2 instances)
Molecular Structure Viewers
(2 instances)
Sequences
SoftwareType
Analytical
Database
Toolkit
(4 instances)
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Generated: 11/06/2007, 9:22:27 PM, Pacific Standard Time
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