https://www.bioontology.org//mediawiki/api.php?action=feedcontributions&feedformat=atom&user=Adeans 2026-06-05T14:42:29Z User contributions MediaWiki 1.35.9 https://www.bioontology.org//mediawiki/index.php?title=Special:Badtitle/NS200:Main_Page&diff=8517 2009-02-27T20:23:02Z

<p>Adeans: /* PATO - Phenotypic Quality Ontology */</p> <hr /> <div>==PATO - Phenotypic Quality Ontology==<br /> <br /> This wiki page currently serves as the home page for the PATO project and related efforts<br /> <br /> === What is PATO? ===<br /> <br /> PATO is an ontology of '''phenotypic qualities''', intended for use in a<br /> number of applications, primarily defining composite phenotypes and phenotype annotation.<br /> <br /> For more details, see<br /> <br /> * [[PATO:About]]<br /> <br /> === How to cite PATO ===<br /> <br /> * [[PATO:Citation]]<br /> <br /> ==Resources==<br /> <br /> the NCBO will be developing resources to support PATO. <br /> <br /> ===Annotation data involving PATO===<br /> <br /> No centralised repository yet. See<br /> <br /> * [[PATO:Annotations]]<br /> <br /> ===Annotation tools that utilize PATO===<br /> <br /> * http://phenote.org<br /> <br /> ===Phenotype Ontologies===<br /> <br /> These will soon be available from [[NCBO BioPortal]]. For now you should just obtain them from http://obo.sourceforge.net/browse.html<br /> <br /> ; [http://obo.sourceforge.net/cgi-bin/detail.cgi?quality PATO] : Phenotypic qualities that form the building blocks of phenotype descriptions. Also available [http://purl.org/obo/owl/PATO in OWL] (see also [[PATO:Phenotypes_in_OWL]])<br /> ; [http://obo.sourceforge.net/cgi-bin/detail.cgi?mammalian_phenotype Mammalian Phenotype]: Composite phenotype terms for the description of phenotype in Mammalia<br /> ; [http://obo.sourceforge.net/cgi-bin/detail.cgi?plant_trait Plant Trait]: Composite phenotype terms for phenotype in plants<br /> ; Yeast<br /> ; Worm<br /> <br /> See [[PATO:Pre_vs_Post_Coordinating]] for preliminary work on reconciling the pre vs post composition approaches<br /> <br /> ===Request tracker===<br /> <br /> You can use the tracker (currently hosted on sourceforge) to request new terms or suggest modifications<br /> <br /> * [http://sourceforge.net/tracker/?group_id=76834&amp;atid=595654 PATO Request tracker on sourceforge]<br /> <br /> Requests for new terms should preferably come attached with proposed definitions and sources for those definitions<br /> <br /> ===Mail list===<br /> <br /> The OBO Phenotype list is for discussion of phenotypes in general (not restricted to PATO)<br /> <br /> You can subscribe or browse the archives here:<br /> <br /> * [https://lists.sourceforge.net/lists/listinfo/obo-phenotype OBO-Phenotype Mail List]<br /> <br /> The mail list is for discussion of PATO and phenotype annotation in general<br /> <br /> ==Meetings and Events==<br /> <br /> * [[PATO_Meeting]] - Phenotype ontology meeting in Palo Alto, CA, December 1-2, 2006<br /> <br /> ==Presentations, papers and external links==<br /> <br /> * [[Media:pato-stanford-nov-2006.ppt]]<br /> <br /> * [http://obofoundry.org The OBO Foundry]</div>

Adeans https://www.bioontology.org//mediawiki/index.php?title=Special:Badtitle/NS200:Main_Page&diff=8516 2009-02-27T20:22:25Z

<p>Adeans: /* PATO - Phenotypic Quality Ontology */</p> <hr /> <div>==PATO - Phenotypic Quality Ontology==<br /> <br /> This wiki page currently serves as the home page for the PATO project and related efforts<br /> <br /> === What is PATO? ===<br /> <br /> PATO is an ontology of '''phenotypic qualities''', intended for use in a<br /> number of applications, primarily defining composite phenotypes and phenotype annotation.<br /> <br /> For more details, see<br /> <br /> * [[PATO:About]]<br /> <br /> === How to cite PATO ===<br /> <br /> ==Resources==<br /> <br /> the NCBO will be developing resources to support PATO. <br /> <br /> ===Annotation data involving PATO===<br /> <br /> No centralised repository yet. See<br /> <br /> * [[PATO:Annotations]]<br /> <br /> ===Annotation tools that utilize PATO===<br /> <br /> * http://phenote.org<br /> <br /> ===Phenotype Ontologies===<br /> <br /> These will soon be available from [[NCBO BioPortal]]. For now you should just obtain them from http://obo.sourceforge.net/browse.html<br /> <br /> ; [http://obo.sourceforge.net/cgi-bin/detail.cgi?quality PATO] : Phenotypic qualities that form the building blocks of phenotype descriptions. Also available [http://purl.org/obo/owl/PATO in OWL] (see also [[PATO:Phenotypes_in_OWL]])<br /> ; [http://obo.sourceforge.net/cgi-bin/detail.cgi?mammalian_phenotype Mammalian Phenotype]: Composite phenotype terms for the description of phenotype in Mammalia<br /> ; [http://obo.sourceforge.net/cgi-bin/detail.cgi?plant_trait Plant Trait]: Composite phenotype terms for phenotype in plants<br /> ; Yeast<br /> ; Worm<br /> <br /> See [[PATO:Pre_vs_Post_Coordinating]] for preliminary work on reconciling the pre vs post composition approaches<br /> <br /> ===Request tracker===<br /> <br /> You can use the tracker (currently hosted on sourceforge) to request new terms or suggest modifications<br /> <br /> * [http://sourceforge.net/tracker/?group_id=76834&amp;atid=595654 PATO Request tracker on sourceforge]<br /> <br /> Requests for new terms should preferably come attached with proposed definitions and sources for those definitions<br /> <br /> ===Mail list===<br /> <br /> The OBO Phenotype list is for discussion of phenotypes in general (not restricted to PATO)<br /> <br /> You can subscribe or browse the archives here:<br /> <br /> * [https://lists.sourceforge.net/lists/listinfo/obo-phenotype OBO-Phenotype Mail List]<br /> <br /> The mail list is for discussion of PATO and phenotype annotation in general<br /> <br /> ==Meetings and Events==<br /> <br /> * [[PATO_Meeting]] - Phenotype ontology meeting in Palo Alto, CA, December 1-2, 2006<br /> <br /> ==Presentations, papers and external links==<br /> <br /> * [[Media:pato-stanford-nov-2006.ppt]]<br /> <br /> * [http://obofoundry.org The OBO Foundry]</div>

Adeans