NCBO Wiki - User contributions [en]

CL:Main Page

2007-11-05T21:29:28Z

Ceri:

=CL - OBO Cell Ontology=

=Resources=

==Ontology==

Will soon be available from [[NCBO BioPortal]]. For now you should just obtain it from http://obo.sourceforge.net

===Applications===

[[CL:Aligning species-specific anatomy ontologies with CL]]

==Request tracker==

- [http://sourceforge.net/tracker/?group_id=76834&atid=925065 CL tracker]

You can also submit requests to the list.

==Mail Lists==

- [https://lists.sourceforge.net/lists/listinfo/obo-cell-type OBO Cell]

The following list may also be of interest

- [https://lists.sourceforge.net/lists/listinfo/obo-crossproduct OBO CrossProduct]

GO is pre-coordinating biological process terms that refer to cell types using CL IDs

==Cell ontology restructuring efforts==

The cell ontology is being restructured with the general goals of improving definitions, moving towards single inheritance and is_a completeness, and making the CL more interoperable with the GO and CARO. These discussions are occurring via chat, the histories of which will be posted here. Please email the OBO cell list if you would like to participate.

[[Media:cell_ontology_evaluation.doc|cell ontology evaluation.doc]]

[[Media:cellchat.2.12.07.doc|cellchat.2.12.07.doc]]

[[Media:cellchat.2.23.07.doc|cellchat.2.23.07.doc]]

[[Media:cellchat.2.27.07.doc|cellchat.2.27.07.doc]]

[[Media:cellchat.3.15.07.doc|cellchat.3.15.07.doc]]

[[Media:cellchat.6.1.07.doc|cellchat.6.1.07.doc]]

[[Media:cellchat.8-9-2007.doc|cellchat.8-9-2007]]

[[Media:cell_chat_8-24-2007.doc|cell_chat_8-24-2007]]

An initial rough draft can be found below in OBO format with the proposed new branch at the same level as 'cell'. Current tasks include moving cells over to the 'by structure' branch to test for compatibility and potential problems.

[[Media:CLRevised.obo|CL Revised.obo]]

Notes and action items from the cell ontology breakout session at the 2nd International Biocuration Meeting 2007.
[[Media:Cell_ontology_reorganization_working_group_notes.doc|Cell_ontology_reorganization_working_group_notes.doc]]

File:Cell ontology reorganization working group notes.doc

2007-11-05T21:28:48Z

Ceri:

CL:Main Page

2007-08-24T19:17:29Z

Ceri:

File:Cell chat 8-24-2007.doc

2007-08-24T19:15:58Z

Ceri:

CL:Main Page

2007-08-09T16:49:33Z

Ceri: /* Cell ontology restructuring efforts */

=CL - OBO Cell Ontology=

=Resources=

==Ontology==

Will soon be available from [[NCBO BioPortal]]. For now you should just obtain it from http://obo.sourceforge.net

===Applications===

[[CL:Aligning species-specific anatomy ontologies with CL]]

==Request tracker==

- [http://sourceforge.net/tracker/?group_id=76834&atid=925065 CL tracker]

You can also submit requests to the list.

==Mail Lists==

- [https://lists.sourceforge.net/lists/listinfo/obo-cell-type OBO Cell]

The following list may also be of interest

- [https://lists.sourceforge.net/lists/listinfo/obo-crossproduct OBO CrossProduct]

GO is pre-coordinating biological process terms that refer to cell types using CL IDs

==Cell ontology restructuring efforts==

The cell ontology is being restructured with the general goals of improving definitions, moving towards single inheritance and is_a completeness, and making the CL more interoperable with the GO and CARO. These discussions are occurring via chat, the histories of which will be posted here. Please email the OBO cell list if you would like to participate.

[[Media:cell_ontology_evaluation.doc|cell ontology evaluation.doc]]

[[Media:cellchat.2.12.07.doc|cellchat.2.12.07.doc]]

[[Media:cellchat.2.23.07.doc|cellchat.2.23.07.doc]]

[[Media:cellchat.2.27.07.doc|cellchat.2.27.07.doc]]

[[Media:cellchat.3.15.07.doc|cellchat.3.15.07.doc]]

[[Media:cellchat.6.1.07.doc|cellchat.6.1.07.doc]]

[[Media:cellchat.8-9-2007.doc|cellchat.8-9-2007]]

An initial rough draft can be found below in OBO format with the proposed new branch at the same level as 'cell'. Current tasks include moving cells over to the 'by structure' branch to test for compatibility and potential problems.

[[Media:CLRevised.obo|CL Revised.obo]]

CL:Main Page

2007-08-09T16:49:17Z

Ceri: /* Cell ontology restructuring efforts */

=CL - OBO Cell Ontology=

=Resources=

==Ontology==

Will soon be available from [[NCBO BioPortal]]. For now you should just obtain it from http://obo.sourceforge.net

===Applications===

[[CL:Aligning species-specific anatomy ontologies with CL]]

==Request tracker==

- [http://sourceforge.net/tracker/?group_id=76834&atid=925065 CL tracker]

You can also submit requests to the list.

==Mail Lists==

- [https://lists.sourceforge.net/lists/listinfo/obo-cell-type OBO Cell]

The following list may also be of interest

- [https://lists.sourceforge.net/lists/listinfo/obo-crossproduct OBO CrossProduct]

GO is pre-coordinating biological process terms that refer to cell types using CL IDs

==Cell ontology restructuring efforts==

The cell ontology is being restructured with the general goals of improving definitions, moving towards single inheritance and is_a completeness, and making the CL more interoperable with the GO and CARO. These discussions are occurring via chat, the histories of which will be posted here. Please email the OBO cell list if you would like to participate.

[[Media:cell_ontology_evaluation.doc|cell ontology evaluation.doc]]

[[Media:cellchat.2.12.07.doc|cellchat.2.12.07.doc]]

[[Media:cellchat.2.23.07.doc|cellchat.2.23.07.doc]]

[[Media:cellchat.2.27.07.doc|cellchat.2.27.07.doc]]

[[Media:cellchat.3.15.07.doc|cellchat.3.15.07.doc]]

[[Media:cellchat.6.1.07.doc|cellchat.6.1.07.doc]]

[[Media:cellchat.8-9-2007.doc|cellchat.8-9-2007]]
An initial rough draft can be found below in OBO format with the proposed new branch at the same level as 'cell'. Current tasks include moving cells over to the 'by structure' branch to test for compatibility and potential problems.

[[Media:CLRevised.obo|CL Revised.obo]]

File:Cellchat.8-9-2007.doc

2007-08-09T16:47:06Z

Ceri: