https://www.bioontology.org//mediawiki/index.php?action=history&feed=atom&title=PhenoAgendaPhenoAgenda - Revision history2026-06-05T10:04:54ZRevision history for this page on the wikiMediaWiki 1.35.9https://www.bioontology.org//mediawiki/index.php?title=PhenoAgenda&diff=9586&oldid=prevPhismith: New page: == Phenotype Ontology Content Workshop == '''Friday, November 18th '''6:00 Arrivals, meet for dinner at Blackford Hall, revise agenda as needed '''Saturday, November 19th''' 8:30 Int...2009-12-26T00:59:17Z<p>New page: == Phenotype Ontology Content Workshop == '''Friday, November 18th '''6:00 Arrivals, meet for dinner at Blackford Hall, revise agenda as needed '''Saturday, November 19th''' 8:30 Int...</p>
<p><b>New page</b></p><div><br />
== Phenotype Ontology Content Workshop ==<br />
<br />
'''Friday, November 18th<br />
'''6:00 Arrivals, meet for dinner at Blackford Hall, revise agenda as needed <br />
<br />
'''Saturday, November 19th''' <br />
8:30 Introductions<br />
9:00 Monte Westerfield Requirements and Goals for Z-fin<br />
9:30 Rachel Drysdale Requirements and Goals for fly<br />
10:00 Break<br />
10:30 John Day-Richter Current OBO-Edit status<br />
11:00 Chris Mungall Evaluation of PATO, architecture proposal<br />
11:30 Topic 1 discussion<br />
12:30 lunch<br />
2:00 Topics 1-3 discussions<br />
5:00 Dinner<br />
<br />
'''Sunday, November 20th''' <br />
9:00 Suzanna Lewis Summary of day 1 action items<br />
9:30 Michael & Jonathan Best practices for annotation<br />
10:00 Mark Musen cBiO collaborations<br />
10:30 break<br />
11:00 Topic 2 discussion<br />
12:30 lunch<br />
2:00 Topics 4 discussion<br />
3:30 Suzanna Lewis Summary of action items<br />
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'''Topic 1: PATO structure & content discussion'''<br />
Re-evaluate modeling of phenotypes to ensure we are taking a viable approach. Take a good look at the "entity-attribute-value" model to consider potential flaws.<br />
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'''Topic 2: Selection of genes for evaluation phase'''<br />
Determine the algorithm that will be used to select the first 100 genes to annotate in the various organisms <br />
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'''Topic 3: Milestones'''<br />
Establish requirements for the annotation tool, and what will be the first deliverables.<br />
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'''Topic 4: Annotation methodology'''<br />
What measures can we take for quality control and establishing a Standard Operating Procedure.<br />
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'''Topic 5: Collaboration plans<br />
'''Plans for supporting affiliated R01 grantees.</div>Phismith