Difference between revisions of "Infectious Disease Ontology"

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== Recommended Background Reading ==
 
== Recommended Background Reading ==
* http://www.ifomis.uni-saarland.de/projects/bfo/manual/: Comprehensive introduction to ontology in general and the Basic Formal Ontology specifically
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* For a comprehensive introduction to ontology in general and the Basic Formal Ontology specifically, see http://www.ifomis.uni-saarland.de/projects/bfo/manual/
 
* Common Errors in OWL: http://www.co-ode.org/resources/papers/CommonErrorsInOWL.pdf
 
* Common Errors in OWL: http://www.co-ode.org/resources/papers/CommonErrorsInOWL.pdf
* [[Relations_in_anatomical_ontologies_sa.pdf‎]]: explanation of the necessity of logic-based relations for automatic reasoning over ontologies
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* For an explanation of the necessity of logic-based relations for automatic reasoning over ontologies, see [[Relations_in_anatomical_ontologies_sa.pdf‎]]
* [[Relations_in_Biomedical_Ontologies.pdf‎]]: Introduction to the Relations Ontology, describes the formulation of logic-based relations for OBO foundry ontologies
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* For an introduction to the Relations Ontology and a description of the formulation of logic-based relations for OBO foundry ontologies, see [[Relations_in_Biomedical_Ontologies.pdf‎]]
*   A reference ontology for bioinformatics: the Foundational Model of Anatomy: http://sigpubs.biostr.washington.edu/archive/00000135/01/jbi-fma.pdf:
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* For a description of the Foundational Model of Anatomy and the basic principles of ontology development, see http://sigpubs.biostr.washington.edu/archive/00000135/01/jbi-fma.pdf
* Ontology Development for Biological Systems: immunology: http://bioinformatics.oxfordjournals.org/cgi/reprint/23/7/913: Revisions to GO BP relevant to immunology
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* For a description of the representation of immunological process in the Gene Ontology Biological Process Ontology, see http://bioinformatics.oxfordjournals.org/cgi/reprint/23/7/913
  
 
== Downloads ==
 
== Downloads ==

Revision as of 08:00, 12 September 2007

Contents

News

The upcoming Infectious Disease Ontology Workshop (see link below under "Meetings") is intended to be both a training workshop for participants and a forum through which we can establish a community for development, maintenance, and use of the Infectious Disease Ontology (IDO). The current agenda for the workshop can be viewed here.

In preparation for the workshop, we have prepared a draft infectious disease ontology and hope that workshop attendees will take time to comment on the ontology in advance of the workshop using the discussion page of this wiki. The ontology can be viewed here.

Recommended Background Reading

Downloads

Meetings

September 19-20, 2007

September 21, 2007

Past Meetings

November 6-7, 2006

Links

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