Difference between revisions of "OntologyRelations"

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# To add new relationships to RO: [[RO:Main_Page | Current Proposals for new relations ]]
 
# To add new relationships to RO: [[RO:Main_Page | Current Proposals for new relations ]]
 +
#* The "regulates" relationship
 +
#* The relations that are required for anatomies and development
 +
#* The relations that are required for describing phenotypic data
 +
#* The relations that are required for cross-products between anatomy and biological process
 
# To consolidate the methodology for doing so
 
# To consolidate the methodology for doing so
# More specifics??
 
  
There is no formal agenda. We will simply prioritize the above items and move through them one by one.
+
=== Monday, May 19th 2008 ===
 +
 
 +
8:30 Suzi Lewis: Logistics and protocols
 +
 
 +
9:00 Introductions: why you attended, background and expertise
 +
 
 +
9:30 David Hill: Outlining the issues with the "regulates" relationship
 +
 
 +
10:00 break
 +
 
 +
10:00 Discussion of the "regulates" relationship
 +
 
 +
11:30 Melissa Haendel?: Outlining the issues with the relations that are required for anatomies and development
 +
 
 +
12:00 Lunch
 +
 
 +
13:00 Discussion of the relations that are required for anatomies and development
 +
 
 +
15:00 break
 +
 
 +
15:30 Chris Mungall: Outlining the issues with the relations that are required for describing phenotypic data
 +
 
 +
16:00 Discussion of the relations that are required for describing phenotypic data
 +
 
 +
18:00 break
 +
 
 +
19:30 dinner
  
 
== Dates ==
 
== Dates ==

Revision as of 11:33, 2 January 2008

Workshop on the Relationship Ontology

Goals

The National Center for Biomedical Ontology will host a two-day workshop focused on the relationship between terms (classes) in ontologies.

The goals of this workshop are to develop the content of the relationship ontology. In particular we will discuss these areas:

  1. To add new relationships to RO: Current Proposals for new relations
    • The "regulates" relationship
    • The relations that are required for anatomies and development
    • The relations that are required for describing phenotypic data
    • The relations that are required for cross-products between anatomy and biological process
  2. To consolidate the methodology for doing so

Monday, May 19th 2008

8:30 Suzi Lewis: Logistics and protocols

9:00 Introductions: why you attended, background and expertise

9:30 David Hill: Outlining the issues with the "regulates" relationship

10:00 break

10:00 Discussion of the "regulates" relationship

11:30 Melissa Haendel?: Outlining the issues with the relations that are required for anatomies and development

12:00 Lunch

13:00 Discussion of the relations that are required for anatomies and development

15:00 break

15:30 Chris Mungall: Outlining the issues with the relations that are required for describing phenotypic data

16:00 Discussion of the relations that are required for describing phenotypic data

18:00 break

19:30 dinner

Dates

Monday and Tuesday, May 19-20, 2008

Logistics

University of Colorado Medical School

Details on location, transportation and hotels forthcoming...

Invited Participants

Participants will include:

Mike Bada (host / Denver, CO) confirmed

Thomas Bittner (Center for Ontology / Buffalo, NY)

Judith Blake (JAX / Bar Harbor, ME) confirmed

Pierre Grenon (IFOMIS / Saarbruecken, Germany)

Melissa Haendel (ZFIN / Eugene, OR)

David Hill (MGI / Bar Harbor, ME)

Larry Hunter (host / Denver, CO) confirmed

Waclaw Kusnierczyk (Bergen, Norway)

Suzi Lewis (NCBO / Berkeley, CA) confirmed

Chris Mungall (NCBO / Berkeley, CA)

Fabian Neuhaus (NIST / Wash, DC)

David Osumi-Sutherland (FlyBase / Cambridge, UK)

Cornelius Rosse (FMA / Seattle, WA)

Alan Ruttenberg (Science Commons / Cambridge, MA) confirmed

Barry Smith (NCBO / Buffalo, NY) confirmed

Background Material

Relation Ontology Home

Current Proposals for new relations