Difference between revisions of "Toolbox"

From NCBO Wiki
Jump to: navigation, search
(Existing Ontologies)
m (Data)
 
(2 intermediate revisions by one user not shown)
Line 22: Line 22:
  
 
NIAID -> PIR
 
NIAID -> PIR
 +
 +
Univ. of Michigan: Vaccine DB
 +
 +
[http://pathport.vbi.vt.edu/pathinfo/ PathPort]: The Pathogen Portal Project
  
 
== Existing Ontologies ==
 
== Existing Ontologies ==
Line 39: Line 43:
  
 
PRO [http://pir.georgetown.edu/pro/]
 
PRO [http://pir.georgetown.edu/pro/]
 +
 +
OBI [http://obi.sourceforge.net/index.php]
  
 
== Agenda: ==
 
== Agenda: ==
Line 53: Line 59:
  
 
additional relations
 
additional relations
 +
 +
 +
 +
== Future plans ==
 +
 +
Contributions:
 +
 +
Univ. of Michigan: Brucellosis
 +
 +
Crete: Vector-born diseases (Malaria)
 +
 +
CSU: Dengue
 +
 +
UT Southwestern: Pathogen-related terms
 +
 +
Cleveland Clinic: Infective endocarditis
 +
 +
MITRE: Influenza
 +
 +
Mt. Sinai: Influenza

Latest revision as of 14:42, 20 September 2007

Contents

[edit] Morning session 09/20/07

[edit] Data

TBDB (TB Data + Microarray)

SMD (Stanford Microarray Data)

Virulence Factor DB

Dengue Case Data

Insect/Vector Epidemiological Data (Gates Funded)

Proteomics Data (comparative data on strains of pathogens)

GOA for plants adn animals (response to other organism)

Sequence data for Influenza (infected animal)

NIAID -> PIR

Univ. of Michigan: Vaccine DB

PathPort: The Pathogen Portal Project

[edit] Existing Ontologies

GO [1] (PAMGO [2], Immune System Process)

FMA [3]

CARO [4]

D.O. [5]

EnvO [6]

ChEBI [7]

PRO [8]

OBI [9]

[edit] Agenda:

scope

term list

BFO type

taxonomy

additional relations


[edit] Future plans

Contributions:

Univ. of Michigan: Brucellosis

Crete: Vector-born diseases (Malaria)

CSU: Dengue

UT Southwestern: Pathogen-related terms

Cleveland Clinic: Infective endocarditis

MITRE: Influenza

Mt. Sinai: Influenza

Personal tools
Namespaces

Variants
Actions
Navigation
Toolbox