Difference between revisions of "Toolbox"

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(Existing Ontologies)
(Existing Ontologies)
Line 26: Line 26:
  
  
GO [http://www.geneontology.org/] (PANGO, Immune System Process)
+
GO [http://www.geneontology.org/] (PAMGO [http://pamgo.vbi.vt.edu/], Immune System Process)
  
 
FMA [http://sig.biostr.washington.edu/projects/fm/]
 
FMA [http://sig.biostr.washington.edu/projects/fm/]
  
CARO
+
CARO [http://www.bioontology.org/wiki/index.php/CARO:Main_Page]
  
 
D.O. [http://diseaseontology.sourceforge.net/]
 
D.O. [http://diseaseontology.sourceforge.net/]
Line 38: Line 38:
 
ChEBI [http://www.ebi.ac.uk/chebi/]
 
ChEBI [http://www.ebi.ac.uk/chebi/]
  
PRO
+
PRO [http://pir.georgetown.edu/pro/]
  
 
== Agenda: ==
 
== Agenda: ==

Revision as of 08:08, 20 September 2007

Contents

Morning session 09/20/07

Data

TBDB (TB Data + Microarray)

SMD (Stanford Microarray Data)

Virulence Factor DB

Dengue Case Data

Insect/Vector Epidemiological Data (Gates Funded)

Proteomics Data (comparative data on strains of pathogens)

GOA for plants adn animals (response to other organism)

Sequence data for Influenza (infected animal)

NIAID -> PIR

Existing Ontologies

GO [1] (PAMGO [2], Immune System Process)

FMA [3]

CARO [4]

D.O. [5]

EnvO [6]

ChEBI [7]

PRO [8]

Agenda:

scope

term list

BFO type

taxonomy

additional relations

Personal tools
Namespaces

Variants
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