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Morning session 09/20/07
Data
TBDB (TB Data + Microarray)
SMD (Stanford Microarray Data)
Virulence Factor DB
Dengue Case Data
Insect/Vector Epidemiological Data (Gates Funded)
Proteomics Data (comparative data on strains of pathogens)
GOA for plants adn animals (response to other organism)
Sequence data for Influenza (infected animal)
NIAID -> PIR
Univ. of Michigan: Vaccine DB
Existing Ontologies
GO [1] (PAMGO [2], Immune System Process)
FMA [3]
CARO [4]
D.O. [5]
EnvO [6]
ChEBI [7]
PRO [8]
OBI [9]
Agenda:
scope
term list
BFO type
taxonomy
additional relations
Future plans
Contributions:
Univ. of Michigan: Brucellosis
Crete: Vector-born diseases (Malaria)
CSU: Dengue
UT Southwestern: Pathogen-related terms
Cleveland Clinic: Infective endocarditis
MITRE: Influenza
Mt. Sinai: Influenza