DRAFT AGENDA
Preliminary Agenda
Thursday, March 27, 2008
Day 2 second session - approach for extending current pathway ontologies into an OBO Foundry framework (TBD)
- 9:00am Registration and Continental Breakfast
- 9:30am Participant Self-Introductions
- Session 1 - Biology of Pathways and Networks and Associated Data Resources (Moderator: TBD)
- Potential presenters:
- Sealfon, Gough, Fiona Brinkman, d'Eustachio, Srinivasan
- Potential topics:
- signalling pathways, metabolic pathways, ...
- regulatory networks, interaction networks, gene expression correlation networks, physiological networks, neurocurrent networks, water balance networks, social networks, co-citation networks ...)
- types of regulation (hormone regulation, organismal regulation, thermal regulation, blood pressure regulation ...)
- granularity (molecular, cellular, physiological) ...
- 10:00am
- 11:00am Refreshment Break
- 11:15am
- 12:30pm Lunch Break
- 1:30pm Session 2 - Computational Analysis of Pathway and Network Data (Moderator: Ruttenberg)
- Potential presenters:
- Ma'ayan, Rzhetsky, Scheuermann, Splendiani
- 3:30pm Refreshment Break
- 3:45pm Session 3 - Introduction to Ontology (Moderator: Smith)
- Potential presenters
- Smith
- 5:00pm End of Day 1
Friday, March 28, 2008 - NETWORK DAY
- 8:30am Continental Breakfast
- 9:00am Session 4: State-of-the-art in pathway ontologies (TBD) -
(Moderator: Richard Scheuermann)
- Potential presenters:
- Fukuda, Sander, Srinivasan
- 10:45am Refreshment Break
- 11:00am Session 4 - Existing Resources in Network Ontology (Moderator: TBD)
- Presenters:
- Balaji S. Srinivasan: Current Progress on Network Ontology
- Presenters:
- 1pm Lunch Break
- 2:00 Session 5 - Gaps in Network Ontology (Moderator: Yves Lussier)
- Presenters:
- Yves Lussier: Cellular Networks and their Surroundings: Tissues, the Extracellular Matrix, and Cell-Environment Interactions
- Presenters:
- 4:00pm End of Day 2