Difference between revisions of "OBD:Phenotypes"
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(New page: OBD uses generic modeling constructs. Domain specific modeling is left to ontologies. OBD has no information model for representing genotype-phenotype associations. Phenotype description...) |
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Revision as of 16:43, 6 May 2008
OBD uses generic modeling constructs. Domain specific modeling is left to ontologies. OBD has no information model for representing genotype-phenotype associations.
Phenotype descriptions in OBD can be [PATO:Pre_vs_Post_Coordinating|pre-coordinated or post-coordinated]. Post-coordinated descriptions make use of what is sometimes called the EQ model. See the [PATO:About] page for more details on this methodology.
EQ based descriptions can be expressed as intersection-based class expressions.
This is explained in
Chris Mungall et al Representing Phenotypes in OWL Proceedings of the OWLED 2007 Workshop on OWL: Experience and Direction
Also on the wiki:
[PATO:Phenotypes_in_OWL]