Meetings and Events
On the internal calendar.
Upcoming meetings
- Phenotype Annotation Meeting
- May 17-20, Hinxton, UK
- Attending: Monte, Erik, Michael, George, Gillian, Suzi, Chris M., Mark G.
- Training Course in Biomedical Ontologies
- http://ontology.buffalo.edu/06/os2/index.html
- May 21-24, 2006, Schloss Dagstuhl, Germany
- Barry
- NSF/RCN workshop on ontology and phylogeny
- May 21-24, St. Louis
- Attending: Michael, Suzi, Monte
- Core 1 & 2 Project Meeting
- Tentatively June 27-28, 2006, Berkeley
- Working plan for core 1 & 2 goals
- NCBC Biomedical Ontology Workshop
- Later in 2006
- Other NCBC's
- NCBC All Hands Meeting
- July 17-19, 2006, Washington, DC
- Attending: Mark, Daniel, Barry, Monte, Michael, Chris Ch., Peggy or Chris Ca., Chris M.
- In Silico Analysis of Proteins. Celebrating the 20th Anniversary of Swiss-Prot
- Jul 30- August 4, 2006, Fortaleza, Brazil.
- http://www.swissprot20.org/
- Attending: Michael Ashburner, Suzi
- ISMB, 2006
- August 6-10, 2006. Fortaleza, Brazil.
- http://ismb2006.cbi.cnptia.embrapa.br/
- Attending: Michael, Suzi (Keynote speaker in Bio-ontologies)
- IEEE Computational Systems Bioinformatics, 2006
- August, 2006. Stanford University
- http://conferences.computer.org/bioinformatics/
- Attending: Mark Musen (Keynote speaker), rest of Stanford group (tutorial in bioontologies/semantic web)
- Anatomy Ontology Workshop
- September 8-9, 2006, Seattle
- information on the Anatomy Ontology Workshop
- Attending: Michael, Suzi, Monte, Barry, Fabian, Melissa, David
- Fall Project Meeting
- Tentatively Oct. 23-25, 2006, Stanford
- Advisory Board invited
- American Society of Human Genetics
- October 9-13, 2006, New Orleans, LA
- Presentation to find collaborators, also ontology workshop
- Disease Ontology Workshop
- In association with FOIS 2006 (Formal Ontology and Information Systems)
- November 6-8, 2006, John Hopkins University, Baltimore
- information on the Disease Ontology Workshop
- Attending: Barry, Suzi, Chris, Rex, Monte, Fabian
2007
- Ontology Interoperability in Biomedicine
- March 27-30, 2007, Dagstuhl, Germany
- Invitation only
- Dagstuhl Seminarium: Ontologies and Text Mining for Life Sciences
- July 23-27, 2007: Dagstuhl, Germany
- Organizers: Ulf Leser, Dietrich Rebholz-Schuhmann & Michael Ashburner
- Attending: Michael Ashburner
- http://www.dagstuhl.de/07301
- Ontology Summer School
- Aug. ??? 2007, Buffalo
- NECTAR Clinical Research Ontology Workshop
- ???, 2007, Bethesda ???
- All NCBCs Ontology workshop
- ???, 2007 with Andreas Califano, Columbia, NY???
- Phenotype Ontology (Upper Level) workshop
- ???
Past meetings
- Fish Evolutionary Biology Working Group Meeting
- April 9-11, National Evolutionary Synthesis Center (NESCent), Durham, NC
- Attending: Monte, Paula, Mark G., Chris M.
- Gene Ontology Workshop
- March 31-April 3, 2006, St. Croix
- Attending: Barry, Michael, Suzi, Chris M.
- Bio-IT LifeSciences Conference
- April 3-6, 2006, Boston, MA
- http://www.lifesciencesexpo.com/live/26/
- Speaker: Michael Ashburner, Ben Franklin Award Lecture.
- Biomedical Image Ontology Workshop
- March 24-25, 2006, Stanford University
- CCB NCBC and others with biomedical image ontologies
- Attending: Barry, Suzi, Stanford Group
- Immunology Ontology Workshop: NIAID
- March 21-22, 2006, Gaitherburg, MD
- Attending: Mark (Session chair), Suzi (speaker), Barry
- Semantic Technology Conference
- March 6-9, 2006, San Jose, California
- http://www.semantic-conference.com/
- Attending: Mark Musen(talk), Deborah McGuinness(keynote, tutorial), Daniel Rubin and Kaustubh Superkar(talk),
- NIH NCRR Animal Models workshop
- March 6-7, 2006, Bethesda, MD
- Attending: Monte
- cBio Project Meeting
- March 2-4, 2006, Stanford University
- Agenda
- http://www.smi.stanford.edu/research/cbio/cbio_meeting.html
- Entire project, NIH Program & Lead Science officers
- BIRN ontology workshop
- February 28-March 1, 2006, Stanford
- Attending: Carol, Chris C., Suzi, Barry, Stanford group
- NLM vocabulary collection and distribution meeting
- February 27-28, 2006, NLM, Washington, DC
- Attending: Chris M., Chris C., Harold, Deepak, James, Tom, John?, Archana?
- cbio_proj_meeting_0306
- March 2-4, 2006
- NIAID meeting
- February, 2006, DC
- Attending: Mark M.
- cBio Phenotype Annotation tool specification
- February 21-23, 2006, LBNL
- Attending: Melissa & Sierra (ZFIN), Suzi, Chris M., Mark G., John, Shu (Berkeley)
- Mini-Syposium on Semantic Enrichment of Scientific Literature
- February 20, 2006 at the European Bioinformatics Institute, Hinxton
- Attending: Michael Ashburner [talk]
- cBio OBD specification
- February 17, 2006, LBNL
- Attending: Ida & Ben (UCSF), Daniel (Stanford), Suzi, Chris M., Mark G., Sima, Shu (Berkeley)
- FuGO meeting
- February 13-15, 2006, Penn, Philadelphia, PA
- http://fugo.sourceforge.net/news/index.php
- Attending: Barry
- Fourth Semantic Interoperability for E-Government Conference
- February 9-10, 2006, MITRE, McLean, VA
- http://colab.cim3.net/cgi-bin/wiki.pl?FourthSemanticInteroperabilityforEGovernmentConference_2006_2_0910
- Attending: Barry
- NIAID BRC3 and Inter Operability Working Group meeting
- February 6-7, 2006, Philadelphia, PA
- http://www.niaid.nih.gov/dmid/genomes/brc/brc3.htm
- Attending: Suzi, Barry
- PharmGKB and cBiO meeting
- January 31, 2006, Stanford
- Attending: Daniel (Stanford), Suzi & Sima (Berkeley), Teri Klein, Tina Boussard, Mark Woon, Russ Altman (PharmGKB)
- Pacific Symposium on Biocomputing, 2006
- Maui, HI, January 2-6, 2006
- Michael Ashburner, Keynote.
- http://psb.stanford.edu/
- NCBC Meeting
- Dec. 15-16, NIH
- Attending: Mark, Suzi, Monte
- Introducting new NCBCs to each other and NIH staff
- Phenotype Annotation Meeting
- December 11-12, 2005, Asilomar conference center
- Attending
- From ZFIN: Monte Westerfield, Erik Segerdell, Melissa Haendel, Paula Mabee
- From FlyBase: Gillian Millburn
- From Berkeley: Suzi Lewis, Chris Mungall, Mark Gibson
- From Victoria: Peggy Storey, Chris Callendar, Sean Falconer
- Define requirements of phenotype annotation tools
- International Biocurator Meeting
- Asilomar, December 8-11, 2005
- http://biocurator.org/intnlbiocurator.html
- Attending: Monte Westerfield (speaker), Chris Mungall (speaker), Sima
- National Bioinformatics Network, South Africa
- December 2, 2005, University of Cape Town.
- Michael Ashburner, Keynote talk at Official Opening.
- Phenotype Ontology Content Workshop
- Nov. 19-20, 2005, CSHL
- Attending
- From cBio: Mark, Nigam, Suzi, Chris, John, Michael, George, Monte, Erik (not Barry)
- Jonathan Bard, XSPAN
- Thomas Bittner, Lou Goldberg, Fabian Neuhaus, NCOR
- Judy Blake, MGD
- Mike Cherry, Jane Lomax, GO
- Rex Chisolm, Pascale Gaudet, NuGene project
- Rachel Drysdale, FlyBase
- Akhilesh Pandey, OMIM
- Anne Kwitek, RGD
- Yves Lussier, SNOMED
- Media:PhenoAgenda.doc
- Stanford/Mayo/Berkeley Meetings
- Nov. 21, 10am-3pm, Stanford; Nov. 22, 10am-3pm, Berkeley
- Attending
- From Stanford: Mark, Daniel, Archana, Lynn, Nigam
- From Berkeley: Suzi, Chris, Sima, Shu, Nomi
- From Mayo: Deepak, Harold, Jim
- Draft Agenda, Mayo/Berkeley Visit, Monday, Nov 21, 2005
- Forbes Dewey Meeting
- Late October, MIT
- Michael Ashburner, chair
- Goal to see if anonymous foundation would pay for ontology content unification, standards, collaboration, etc.
- Genome Informatics Meeting
- Oct. 28-Nov. 1, CSHL
- Suzi will gave presentation on cBio.
- Birds of a feather sessions, one on ontology.
- Workshop on Bio-Ontologies
- October 28, 2005, Buffalo, NY
- http://ontology.buffalo.edu/05/bio-ontologies.pdf
- Presenting: Suzi, Frank Hartel, Sumi Yoshikawa, Olivier Bodenreider, David Hill
- Training session on making ontologies better
- 1st International Annual Conference, Brazilian Association for Bioinformatics and Computational Biology, Caxambu, Brazil
- October, 2006
- Michael Ashburner, Keynote.
- Applied Biosystems Inc., Science Meeting, Asilomar
- September 2005
- Michael Ashburner, Keynote.
- MGED8, Bergen
- September, 2005
- Michael Ashburner, Keynote