BioPortal UI URLs
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The following is a list of standard URLs that can be used with the BioPortal Ruby on Rails User Interface.
Ontology Metadata
- http://bioportal.bioontology.org/ontologies/{ontology_version_id}
- http://bioportal.bioontology.org/ontologies/virtual/{ontology_virtual_id} (redirects to most recent version)
Ontology Visualization
- http://bioportal.bioontology.org/visualize/{ontology_version_id}
- http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id} (redirects to most recent version)
- DEPRECATED: http://bioportal.bioontology.org/virtual/{ontology_virtual_id} (redirects to most recent version)
Term in an Ontology
- Note: Terms should be URL-encoded
- http://bioportal.bioontology.org/visualize/{ontology_version_id}?conceptid={concept_id}
- http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id} (redirects to most recent version)
Annotator
- http://bioportal.bioontology.org/annotator
- Parameters
- semantictype={comma-separated list of semantic type codes}
- ontologyid={comma-separated list of ontology version identifiers}
- Example: http://bioportal.bioontology.org/annotator?semantictype=T002,T020&ontologyid=39215,40223
Resource Index
- http://bioportal.bioontology.org/resources
- Resources for a term: http://bioportal.bioontology.org/visualize/{ontology_version_id}/?conceptid={concept_id}#resource_index
- http://bioportal.bioontology.org/visualize/virtual/{ontology_virtual_id}/?conceptid={concept_id}#resource_index (redirects to most recent version)
Notes
- Notes for an ontology: http://bioportal.bioontology.org/ontologies/{ontology_version_id}#notes
- Notes for a term: http://bioportal.bioontology.org/visualize/{ontology_version_id}#notes