CTS2 RDF Plugin

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CTS2 REST Services

CodeSystemCatalogQuery

Query: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystems
Query with 'name' filter: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystems?matchvalue=nci&filtercomponent=resourceName
Query with 'description' filter: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystems?matchvalue=databases&filtercomponent=resourceSynopsis
Get CodeSystems With Specified Limit: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystems?maxtoreturn=5
Get CodeSystems With Specified Limit and Page: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystems?maxtoreturn=5&page=10

CodeSystemCatalogRead

Read by name: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/TGMA
Read by uri: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystembyuri?uri=http://bioportal.bioontology.org/ontologies/TGMA
Find CodeSystemByURI: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystembyuri?uri=http://bioportal.bioontology.org/ontologies/TGMA
Find CodeSystemByURI with redirect: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystembyuri?uri=http://bioportal.bioontology.org/ontologies/TGMA&redirect=true

CodeSystemCatalogVersionQuery

Query: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystemversions
Query code system versions of code system: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/SNOMEDCT/versions
Query with 'name' filter: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystemversions?matchvalue=nci&filtercomponent=resourceName
Query with 'description' filter: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystemversions?matchvalue=anatomy&filtercomponent=resourceSynopsis
Query by Description (default) http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystemversions?matchvalue=bioinformatics
Query by Name http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystemversions?filtercomponent=resourceName&matchvalue=bioa
Query by CodeSystem URI http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystembyuri/versions?uri=http://bioportal.bioontology.org/ontologies/TGMA
Query by CodeSystem URI (with redirect) http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystembyuri/versions?uri=http://bioportal.bioontology.org/ontologies/TGMA&redirect=true

CodeSystemVersionCatalogRead

CodeSystemCatalogRead by Name http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/CARO/version/CARO-46255
CodeSystemCatalogRead by Official Version Id http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/CL/version/2011-06-03

EntityDescriptionQuery

Query with 'description' http://informatics.mayo.edu/cts2/services/bioportal-rdf/entities?matchvalue=swelling
Get all entities of code system version: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/AIR/version/AIR-42298/entities
Query entities of code system version with 'keyword' filter: http://informatics.mayo.edu/cts2/rest/codesystem/LNC/version/LNC_226_RRF/entities?matchvalue=100

EntityDescriptionRead

Read by name: http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/LNC/version/LNC-44774/entity/LNC:LP97322-9
Read using entity reference http://informatics.mayo.edu/cts2/rest/entity/LNC:LP97322-9
Read using entity references (mutliple Code System Versions) http://informatics.mayo.edu/cts2/rest/entity/obo:IAO_0000030

ValueSetCatalogQuery

Query: http://informatics.mayo.edu/cts2/services/bioportal-rdf/valuesets
ValueSetCatalogQuery by Description (default) http://informatics.mayo.edu/cts2/services/bioportal-rdf//valuesets?matchvalue=subtree
Query with 'name' filter: http://informatics.mayo.edu/cts2/services/bioportal-rdf/valuesets?matchvalue=set&filtercomponent=resourceName
Query with 'description' filter: http://informatics.mayo.edu/cts2/services/bioportal-rdf/valuesets?matchvalue=anatomy&filtercomponent=resourceSynopsis
Query based on code system restriction: http://informatics.mayo.edu/cts2/services/bioportal-rdf/valuesets?codesystem=SNOMEDCT

ValueSetCatalogRead

Read by name: http://informatics.mayo.edu/cts2/services/bioportal-rdf/valueset/SNOMEDCT-MAS

ResolvedValueSetQuery

Get all ResolvedValueSets http://informatics.mayo.edu/cts2/services/bioportal-rdf/resolvedvaluesets
Get ResolvedValueSet http://informatics.mayo.edu/cts2/services/bioportal-rdf/valueset/SNOMEDCT-TF/definition/SNOMEDCT-TF-43049/resolution/43049
Get ResolvedValueSet http://informatics.mayo.edu/cts2/services/bioportal-rdf/valueset/SNOMEDCT-TF/definition/SNOMEDCT-TF-43049/resolution/43049?matchvalue=toe

AssociationQuery

AssociationQuery (all of CodeSystemVersion) http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/ICD9CM/version/ICD9CM-47178/associations
AssociationQuery (children) http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/ICD9CM/version/ICD9CM-47178/entity/E008/children
AssociationQuery (subjectof) http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/ICD9CM/version/ICD9CM-47178/entity/E008/subjectof
AssociationQuery (targetof) http://informatics.mayo.edu/cts2/services/bioportal-rdf/codesystem/ICD9CM/version/ICD9CM-47178/entity/E008/targetof

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