Difference between revisions of "DRAFT AGENDA"
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Day 2 second session - approach for extending current pathway ontologies into an OBO Foundry framework (TBD) | Day 2 second session - approach for extending current pathway ontologies into an OBO Foundry framework (TBD) | ||
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* 9:30am Participant Self-Introductions | * 9:30am Participant Self-Introductions | ||
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* Session 1 - '''Biology of Pathways and Networks and Associated Data Resources (Moderator: TBD)''' | * Session 1 - '''Biology of Pathways and Networks and Associated Data Resources (Moderator: TBD)''' | ||
| − | :Potential presenters: Sealfon, Gough | + | :Potential presenters: |
| + | ::Sealfon, Gough, Fiona Brinkman, d'Eustachio, Srinivasan''' | ||
:Potential topics: | :Potential topics: | ||
::signalling pathways, metabolic pathways, ... | ::signalling pathways, metabolic pathways, ... | ||
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* 1:30pm '''Session 2 - Computational Analysis of Pathway and Network Data (Moderator: Ruttenberg) | * 1:30pm '''Session 2 - Computational Analysis of Pathway and Network Data (Moderator: Ruttenberg) | ||
| − | Potential presenters: Ma'ayan, Rzhetsky, Scheuermann, Splendiani | + | :Potential presenters: |
| − | + | ::Ma'ayan, Rzhetsky, Scheuermann, Splendiani | |
| − | * 3: | + | * 3:30pm Refreshment Break |
| − | * 3: | + | * 3:45pm '''Session 3 - Introduction to Ontology (Moderator: Smith)''' |
| − | :: | + | :Potential presenters |
| + | ::Smith | ||
* 5:00pm End of Day 1 | * 5:00pm End of Day 1 | ||
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* 8:30am Continental Breakfast | * 8:30am Continental Breakfast | ||
| − | * 9:00am Session | + | * 9:00am Session 4: '''State-of-the-art in pathway ontologies (TBD) - |
| + | (Moderator: Richard Scheuermann)''' | ||
| − | + | :Potential presenters: | |
| − | :: | + | ::Fukuda, Sander, Srinivasan |
* 10:45am Refreshment Break | * 10:45am Refreshment Break | ||
Revision as of 10:37, 4 February 2008
Preliminary Agenda
Thursday, March 27, 2008
Day 2 second session - approach for extending current pathway ontologies into an OBO Foundry framework (TBD)
- 9:00am Registration and Continental Breakfast
- 9:30am Participant Self-Introductions
- Session 1 - Biology of Pathways and Networks and Associated Data Resources (Moderator: TBD)
- Potential presenters:
- Sealfon, Gough, Fiona Brinkman, d'Eustachio, Srinivasan
- Potential topics:
- signalling pathways, metabolic pathways, ...
- regulatory networks, interaction networks, gene expression correlation networks, physiological networks, neurocurrent networks, water balance networks, social networks, co-citation networks ...)
- types of regulation (hormone regulation, organismal regulation, thermal regulation, blood pressure regulation ...)
- granularity (molecular, cellular, physiological) ...
- 10:00am
- 11:00am Refreshment Break
- 11:15am
- 12:30pm Lunch Break
- 1:30pm Session 2 - Computational Analysis of Pathway and Network Data (Moderator: Ruttenberg)
- Potential presenters:
- Ma'ayan, Rzhetsky, Scheuermann, Splendiani
- 3:30pm Refreshment Break
- 3:45pm Session 3 - Introduction to Ontology (Moderator: Smith)
- Potential presenters
- Smith
- 5:00pm End of Day 1
Friday, March 28, 2008 - NETWORK DAY
- 8:30am Continental Breakfast
- 9:00am Session 4: State-of-the-art in pathway ontologies (TBD) -
(Moderator: Richard Scheuermann)
- Potential presenters:
- Fukuda, Sander, Srinivasan
- 10:45am Refreshment Break
- 11:00am Session 4 - Existing Resources in Network Ontology (Moderator: TBD)
- Presenters:
- Balaji S. Srinivasan: Current Progress on Network Ontology
- Presenters:
- 1pm Lunch Break
- 2:00 Session 5 - Gaps in Network Ontology (Moderator: Yves Lussier)
- Presenters:
- Yves Lussier: Cellular Networks and their Surroundings: Tissues, the Extracellular Matrix, and Cell-Environment Interactions
- Presenters:
- 4:00pm End of Day 2