NIAID Cell Ontology Workshop Agenda

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NIAID-sponsored Workshop: Immune Cell Representation in the Cell Ontology
May 13 -14, 2008
Bethesda North Marriott Hotel & Conference Center, Salon H
5701 Marinelli Road
Bethesda, Maryland 20852 USA

Note that the Agenda below reflects the timeline of the meeting as it actually occured ; the original Agenda is here.


Agenda

May 13: Adaptive Immune Cell Representation

8:00 - 9:00am Registration/Coffee

9:00 - 9:10 Welcome, NIAID staff

9:10 - 9:20 Brief introduction to the CL and its development, Dr. Alexander Diehl, The Jackson Laboratory (slides)

9:20 - 10:10 Ontologies and the OBO foundry vision of interrelated ontologies, Dr. Chris Mungall, Berkeley Bioinformatics and Ontologies Project (slides)

10:10 - 10:20 Presentation of Meeting Goals, Dr. Alexander Diehl (slides)

10:20 - 10:40 Presentation of additional introductory material, Dr. Richard Scheuermann, UT Southwestern Medical Center (slides)

10:40 - 11:00 BREAK

11:00 - 11:10 T cell representation in CL, Dr. Alexander Diehl (slides, graphical view)

11:10 - 11:30 T cell ontology extension, Dr. Penny Morel, University of Pittsburgh (slides)

11:30 - 12:30 Discussion/Consensus on T cell representation

12:30 - 1:45 – LUNCH

1:45 - 1:55 B cell representation in CL, Dr. Alexander Diehl (slides, graphical view)

1:55 - 2:30 B cell ontology extension, Dr. Martin Zand, University of Rochester Medical Center

2:30 - 3:20 Discussion/Consensus on B cell representation

3:20 - 3:40 BREAK

3:40 - 4:15 Discussion/Consensus on B cell representation

4:15 pm ADJOURN


May 14: Innate Immune Cell Representation

8:00 - 8:45 am Registration/Coffee

8:45 - 9:15 Discussion of proposed T cell changes illustrated in OBO-Edit based on previous day's discussion, led by Dr. Alexander Diehl

9:15 - 9:25 Dendritic cell representation in CL, Dr. Alexander Diehl (graphical view)

9:25 - 10:00 Improvements in dendritic cell representation in CL, Dr. Lindsay G. Cowell, Duke University

10:00 - 10:55 Discussion/Consensus on dendritic cell representation

10:55 - 11:15 BREAK

11:15 - 12:15 Discussion/Consensus on dendritic cell representation

12:15 - 1:30 – LUNCH

1:30 - 2:10 Discussion about relationship types need for CL 2.0, led by Dr. Chris Mungall

2:10 - 2:20 Macrophage representation in CL, Dr. Alexander Diehl (graphical view)

2:20 - 3:15 Discussion/Consensus on macrophage representation

3:15 - 3:25 BREAK

3:25 - 4:00 Meeting wrap up and setting of Action Items

4:00pm ADJOURN

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