Difference between revisions of "OBD:Data Download"
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(New page: == Download raw database dump == * http://www.berkeleybop.org/obd/dumps This can be reconstituted locally == RESTful access == Subsets of data in OBD are resources in their own right....) |
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== Download raw database dump == | == Download raw database dump == | ||
* http://www.berkeleybop.org/obd/dumps | * http://www.berkeleybop.org/obd/dumps | ||
| − | + | These are postgresql dumps and can be reconstituted locally | |
| + | |||
| + | * http://www.berkeleybop.org/obd/dumps/reports/ | ||
| + | * http://www.berkeleybop.org/obd/dumps/exports/ | ||
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| + | |||
| + | |||
| + | Availability: now | ||
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| + | == Raw OWL or RDF dumps == | ||
| + | |||
| + | Not yet available | ||
| + | |||
| + | Unfortunately this crashes D2RQ.. | ||
== RESTful access == | == RESTful access == | ||
Latest revision as of 14:34, 5 March 2008
Download raw database dump
These are postgresql dumps and can be reconstituted locally
Availability: now
Raw OWL or RDF dumps
Not yet available
Unfortunately this crashes D2RQ..
RESTful access
Subsets of data in OBD are resources in their own right. It will soon be possible to directly access any portion of OBD via RESTful URLs
Examples:
- All annotations in OBD-Phenotype subset
- All annotations to entities in OMIM IDspace
- All annotations contributed by ZFIN
- All annotations to classes in FMA
- All annotations added since date
We will need some caching mechanism in place rather than recomputing these each time
Select exports
Pre-computed dumps for select datasets