Difference between revisions of "OntologyRelations"

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8:30 Suzi Lewis: Logistics and protocols
 
8:30 Suzi Lewis: Logistics and protocols
  
9:00 Introductions: why you attended, background and expertise
+
8:45 Introductions: why you attended, background and expertise
  
9:30 David Hill: Outlining the issues with the "regulates" relationship
+
9:00 Barry Smith (moderator): Discussion of methodology for creating new relations (e.g. some-part question)
  
 
10:00 break
 
10:00 break
  
10:00 Discussion of the "regulates" relationship
+
10:30 (continued) Discussion of methodology for creating new relations (e.g. some-part question)
  
11:30 Melissa Haendel?: Outlining the issues with the relations that are required for anatomies and development
+
11:30 Set priorities and ordering of the listed discussion topics.
  
 
12:00 Lunch
 
12:00 Lunch
  
13:00 Discussion of the relations that are required for anatomies and development
+
13:00 Discussion of topics
  
 
15:00 break
 
15:00 break
  
15:30 Chris Mungall: Outlining the issues with the relations that are required for describing phenotypic data
+
15:30 Discussion of topics
  
16:00 Discussion of the relations that are required for describing phenotypic data
+
17:30 Done for the day
 
 
18:00 break
 
  
 
19:30 dinner
 
19:30 dinner
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=== Tuesday, May 20th 2008 ===
 
=== Tuesday, May 20th 2008 ===
  
9:00 TBD: Outlining the issues with the relations that are required for cross-products between anatomy and biological process
+
8:30 Discussion of topics
 +
 
 +
10:30 break
  
9:30 Discussion of the relations that are required for cross-products between anatomy and biological process
+
11:00 Discussion of topics
  
 
12:00 lunch
 
12:00 lunch
  
1:30 Barry Smith: Discussion of methodology for creating new relations
+
1:30 Discussion of topics
  
 
2:30 Suzi Lewis: Summary of the meeting, action items, resolutions, and future plans.
 
2:30 Suzi Lewis: Summary of the meeting, action items, resolutions, and future plans.

Revision as of 20:42, 3 January 2008

Workshop on the Relationship Ontology

Goals

The National Center for Biomedical Ontology will host a two-day workshop focused on the relationship between terms (classes) in ontologies.

The goals of this workshop are to develop the content of the relationship ontology. In particular we will discuss these areas:

  1. To add new relationships to RO: Current Proposals for new relations
    • The "regulates" relationship
    • The relations that are required for anatomies and development
    • The relations that are required for describing phenotypic data
    • The relations that are required for cross-products between anatomy and biological process
  2. To consolidate the methodology for doing so

Draft Agenda

Monday, May 19th 2008

8:30 Suzi Lewis: Logistics and protocols

8:45 Introductions: why you attended, background and expertise

9:00 Barry Smith (moderator): Discussion of methodology for creating new relations (e.g. some-part question)

10:00 break

10:30 (continued) Discussion of methodology for creating new relations (e.g. some-part question)

11:30 Set priorities and ordering of the listed discussion topics.

12:00 Lunch

13:00 Discussion of topics

15:00 break

15:30 Discussion of topics

17:30 Done for the day

19:30 dinner

Tuesday, May 20th 2008

8:30 Discussion of topics

10:30 break

11:00 Discussion of topics

12:00 lunch

1:30 Discussion of topics

2:30 Suzi Lewis: Summary of the meeting, action items, resolutions, and future plans.

3:30 Departures

Dates

Monday and Tuesday, May 19-20, 2008

Logistics

University of Colorado Medical School

Details on location, transportation and hotels forthcoming...

Invited Participants

Participants will include:

Mike Bada (host / Denver, CO) confirmed

Thomas Bittner (Center for Ontology / Buffalo, NY)

Judith Blake (JAX / Bar Harbor, ME) confirmed

Pierre Grenon (IFOMIS / Saarbruecken, Germany)

Melissa Haendel (ZFIN / Eugene, OR)

David Hill (MGI / Bar Harbor, ME)

Larry Hunter (host / Denver, CO) confirmed

Waclaw Kusnierczyk (Bergen, Norway)

Suzi Lewis (NCBO / Berkeley, CA) confirmed

Chris Mungall (NCBO / Berkeley, CA)

Fabian Neuhaus (NIST / Wash, DC)

David Osumi-Sutherland (FlyBase / Cambridge, UK)

Cornelius Rosse (FMA / Seattle, WA)

Alan Ruttenberg (Science Commons / Cambridge, MA) confirmed

Barry Smith (NCBO / Buffalo, NY) confirmed

Background Material

Relation Ontology Home

Current Proposals for new relations