Difference between revisions of "Toolbox"

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(Existing Ontologies)
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NIAID -> PIR
 
NIAID -> PIR
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Univ. of Michigan: Vaccine DB
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== Existing Ontologies ==
 
== Existing Ontologies ==
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additional relations
 
additional relations
 +
 +
 +
 +
== Future plans ==
 +
 +
Contributions:
 +
 +
Univ. of Michigan: Brucellosis
 +
 +
Crete: Vector-born diseases (Malaria)
 +
 +
CSU: Dengue
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UT Southwestern: Pathogen-related terms
 +
 +
Cleveland Clinic: Infective endocarditis
 +
 +
MITRE: Influenza
 +
 +
Mt. Sinai: Influenza

Revision as of 13:30, 20 September 2007

Contents

Morning session 09/20/07

Data

TBDB (TB Data + Microarray)

SMD (Stanford Microarray Data)

Virulence Factor DB

Dengue Case Data

Insect/Vector Epidemiological Data (Gates Funded)

Proteomics Data (comparative data on strains of pathogens)

GOA for plants adn animals (response to other organism)

Sequence data for Influenza (infected animal)

NIAID -> PIR

Univ. of Michigan: Vaccine DB


Existing Ontologies

GO [1] (PAMGO [2], Immune System Process)

FMA [3]

CARO [4]

D.O. [5]

EnvO [6]

ChEBI [7]

PRO [8]

OBI [9]

Agenda:

scope

term list

BFO type

taxonomy

additional relations


Future plans

Contributions:

Univ. of Michigan: Brucellosis

Crete: Vector-born diseases (Malaria)

CSU: Dengue

UT Southwestern: Pathogen-related terms

Cleveland Clinic: Infective endocarditis

MITRE: Influenza

Mt. Sinai: Influenza

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