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April 24, 2012
Faculty: Barry Smith (Buffalo / NCBO) and Nigam Shah (Stanford / NCBO)
- Foundations of Biomedical Ontology
- What is an ontology and what is it useful for?
- The problem of data silos
- NIH mandates for sharing and reuse of research data
- Examples of biomedical ontologies:
- Gene Ontology (GO)
- Foundational Model of Anatomy (FMA)
- Infectious Disease Ontology (IDO)
- Foundations of Biomedical Ontology
- Ontology Technology
- An Introduction to the Semantic Web and the Web Ontology Language (OWL)
- Introduction to NCBO Technology
- Use of Bioportal
- Using ontologies for data retrieval, integration and reasoning
- Success stories
- Basic information on ontology editing tools
- Ontology Technology