Difference between revisions of "Meetings and Events"

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On the [http://datebook.stanford.edu:88/cBiO_Calendar internal calendar].
 
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== Upcoming meetings ==
 
== Upcoming meetings ==
  
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**Jul 30- August 4, 2006, Fortaleza, Brazil.
 
**Jul 30- August 4, 2006, Fortaleza, Brazil.
 
** [http://www.swissprot20.org/ http://www.swissprot20.org/]
 
** [http://www.swissprot20.org/ http://www.swissprot20.org/]
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** Attending: Michael Ashburner, Suzi
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** Attending: Michael Ashburner, Suzanna Lewis
  
 
*'''ISMB, 2006'''
 
*'''ISMB, 2006'''
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**August 6-10, 2006.  Fortaleza, Brazil.
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**August 6-10, 2006, Fortaleza, Brazil.
 
** [http://ismb2006.cbi.cnptia.embrapa.br/ http://ismb2006.cbi.cnptia.embrapa.br/]
 
** [http://ismb2006.cbi.cnptia.embrapa.br/ http://ismb2006.cbi.cnptia.embrapa.br/]
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** Attending: Michael, Suzi (Keynote speaker in Bio-ontologies)
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** Attending: Michael Ashburner, Suzanna Lewis (Keynote speaker for Bio-ontologies SIG)
  
 
*'''IEEE Computational Systems Bioinformatics, 2006'''
 
*'''IEEE Computational Systems Bioinformatics, 2006'''
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**September 8-9, 2006, Seattle
 
**September 8-9, 2006, Seattle
 
**[[Anatomy Ontology Workshop | information on the Anatomy Ontology Workshop]]
 
**[[Anatomy Ontology Workshop | information on the Anatomy Ontology Workshop]]
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**Attending: Michael, Suzi, Monte, Barry, Fabian, Melissa, David  
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**Attending: Michael Ashburner, Suzanna Lewis, Monte Westerfield, Barry Smith, Fabian Neuhaus, Melissa Haendel, David Sutherland
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*'''American Society of Human Genetics'''
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**October 9-13, 2006, New Orleans, LA
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**[http://genetics.faseb.org/genetics/ashg/menu-annmeet.shtml http://genetics.faseb.org/genetics/ashg/menu-annmeet.shtml]
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**Presentation to find collaborators, also ontology workshop
  
 
*'''Fall NCBO Project Meeting'''
 
*'''Fall NCBO Project Meeting'''
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** All Hands meeting
 
** All Hands meeting
 
** Advisory Comm. & NIH Program & Science officers invited
 
** Advisory Comm. & NIH Program & Science officers invited
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*'''American Society of Human Genetics'''
 
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**October 9-13, 2006, New Orleans, LA
 
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**Presentation to find collaborators, also ontology workshop
 
  
 
*'''Disease Ontology Workshop'''
 
*'''Disease Ontology Workshop'''
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**November 6-8, 2006, John Hopkins University, Baltimore
 
**November 6-8, 2006, John Hopkins University, Baltimore
 
**[[Workshop on Ontology of Diseases | information on the Disease Ontology Workshop]]
 
**[[Workshop on Ontology of Diseases | information on the Disease Ontology Workshop]]
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**Attending: Barry, Suzi, Chris, Rex, Monte, Fabian  
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**Attending: Barry Smith, Suzanna Lewis, Chris Mungall, Rex Chisholm, Monte Westerfield, Fabian Neuhaus
  
 
*'''PATO meeting'''
 
*'''PATO meeting'''
 
**November 30-December 2, 2006, Stanford University Clark Center
 
**November 30-December 2, 2006, Stanford University Clark Center
 
** [[PATO Meeting | information about the PATO Meeting]]
 
** [[PATO Meeting | information about the PATO Meeting]]
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**Attending: Suzanna Lewis, Michael Ashburner, Monte Westerfield
  
 
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Revision as of 10:44, 26 July 2006

Upcoming meetings

  • In Silico Analysis of Proteins. Celebrating the 20th Anniversary of Swiss-Prot
  • Anatomy Ontology Workshop
  • Fall NCBO Project Meeting
    • Oct. 23-25, 2006, Stanford
    • All Hands meeting
    • Advisory Comm. & NIH Program & Science officers invited
  • Disease Ontology Workshop
    • In association with FOIS 2006 (Formal Ontology and Information Systems)
    • November 6-8, 2006, John Hopkins University, Baltimore
    • information on the Disease Ontology Workshop
    • Attending: Barry Smith, Suzanna Lewis, Chris Mungall, Rex Chisholm, Monte Westerfield, Fabian Neuhaus

2007

  • Ontology Interoperability in Biomedicine
    • March 27-30, 2007, Dagstuhl, Germany
    • Invitation only
  • Clinical trial ontology workshop
    • Mid-May 2007, near FDA
  • Dagstuhl Seminarium: Ontologies and Text Mining for Life Sciences
    • July 23-27, 2007: Dagstuhl, Germany
    • Organizers: Ulf Leser, Dietrich Rebholz-Schuhmann & Michael Ashburner
    • Attending: Michael Ashburner
    • http://www.dagstuhl.de/07301
  • Spatial reasoning over ontologies
    • Fall, 2007
  • Ontology Training workshops for training workshops
    • Aug. ??? 2007, Buffalo
  • NECTAR Clinical Research Ontology Workshop
    • ???, 2007, Bethesda ???
  • All NCBCs Ontology workshop
    • ???, 2007 with Andreas Califano, Columbia, NY???
  • Phenotype Ontology (Upper Level) workshop
    • ???

Past meetings

  • NCBC All Hands Meeting
    • July 17-19, 2006, Washington, DC
    • Attending: Mark, Daniel, Deborah, Nigam, Barry, Fabian, Louis Goldberg, Jim, Monte, Michael, Chris Callendar, Simona Carini, Chris Mungall, Nicole
    • http://www.bisti.nih.gov/ahm2006/
  • Core 1 & 2 Project Meeting
    • June 27-28, 2006, Berkeley
    • Attending: Mark, Daniel, Archana, Lynn, Nigam, Julie (Stanford); Suzi, Chris M., Sima, Shu, Nicole (Berkeley); Chris Chute, Jim, Harold (Mayo); Peggy (UVic); Sherri (NIH)
    • Working plan for core 1 & 2 goals
  • Core 1 & 2 Meeting
    • June 9, 2006, Berkeley
    • Attending: Daniel, Archana, Lynn, Nigam, Dilvan Moreira (Stanford); Suzi, Chris M., Shu, Nicole (Berkeley); Jim, Harold (Mayo); Chris Callendar (UVic)
  • NSF/RCN workshop on ontology and phylogeny
    • May 21-24, St. Louis
    • Attending: Michael, Suzi, Monte
  • Phenotype Annotation Meeting
    • May 17-20, Hinxton, UK
    • Attending: Monte, Erik, Michael, George, Gillian, Suzi, Chris M., Mark G., Fabian, Nigam
    • Agenda PaTO
  • Fish Evolutionary Biology Working Group Meeting
    • April 9-11, National Evolutionary Synthesis Center (NESCent), Durham, NC
    • Attending: Monte, Paula, Mark G., Chris M.
  • Gene Ontology Workshop
    • March 31-April 3, 2006, St. Croix
    • Attending: Barry, Michael, Suzi, Chris M.
  • Biomedical Image Ontology Workshop
    • March 24-25, 2006, Stanford University
    • CCB NCBC and others with biomedical image ontologies
    • Attending: Barry, Suzi, Stanford Group
  • Immunology Ontology Workshop: NIAID
    • March 21-22, 2006, Gaitherburg, MD
    • Attending: Mark (Session chair), Suzi (speaker), Barry
  • Semantic Technology Conference
    • March 6-9, 2006, San Jose, California
    • http://www.semantic-conference.com/
    • Attending: Mark Musen(talk), Deborah McGuinness(keynote, tutorial), Daniel Rubin and Kaustubh Superkar(talk),
  • NIH NCRR Animal Models workshop
    • March 6-7, 2006, Bethesda, MD
    • Attending: Monte
  • BIRN ontology workshop
    • February 28-March 1, 2006, Stanford
    • Attending: Carol, Chris C., Suzi, Barry, Stanford group
  • NLM vocabulary collection and distribution meeting
    • February 27-28, 2006, NLM, Washington, DC
    • Attending: Chris M., Chris C., Harold, Deepak, Jim, Tom
  • NIAID meeting
    • February, 2006, DC
    • Attending: Mark M.
  • cBio Phenotype Annotation tool specification
    • February 21-23, 2006, LBNL
    • Attending: Melissa & Sierra (ZFIN), Suzi, Chris M., Mark G., John, Shu (Berkeley)
  • Mini-Syposium on Semantic Enrichment of Scientific Literature
    • February 20, 2006 at the European Bioinformatics Institute, Hinxton
    • Attending: Michael Ashburner [talk]
  • cBio OBD specification
    • February 17, 2006, LBNL
    • Attending: Ida & Ben (UCSF), Daniel (Stanford), Suzi, Chris M., Mark G., Sima, Shu (Berkeley)
  • PharmGKB and cBiO meeting
    • January 31, 2006, Stanford
    • Attending: Daniel (Stanford), Suzi & Sima (Berkeley), Teri Klein, Tina Boussard, Mark Woon, Russ Altman (PharmGKB)
  • Pacific Symposium on Biocomputing, 2006
  • NCBC Meeting
    • Dec. 15-16, NIH
    • Attending: Mark, Suzi, Monte
    • Introducting new NCBCs to each other and NIH staff
  • Phenotype Annotation Meeting
    • December 11-12, 2005, Asilomar conference center
    • Attending
      • From ZFIN: Monte Westerfield, Erik Segerdell, Melissa Haendel, Paula Mabee
      • From FlyBase: Gillian Millburn
      • From Berkeley: Suzi Lewis, Chris Mungall, Mark Gibson
      • From Victoria: Peggy Storey, Chris Callendar, Sean Falconer
    • Define requirements of phenotype annotation tools
  • National Bioinformatics Network, South Africa
    • December 2, 2005, University of Cape Town.
    • Michael Ashburner, Keynote talk at Official Opening.
  • Phenotype Ontology Content Workshop
    • Nov. 19-20, 2005, CSHL
    • Attending
      • From cBio: Mark, Nigam, Suzi, Chris, John, Michael, George, Monte, Erik (not Barry)
      • Jonathan Bard, XSPAN
      • Thomas Bittner, Lou Goldberg, Fabian Neuhaus, NCOR
      • Judy Blake, MGD
      • Mike Cherry, Jane Lomax, GO
      • Rex Chisolm, Pascale Gaudet, NuGene project
      • Rachel Drysdale, FlyBase
      • Akhilesh Pandey, OMIM
      • Anne Kwitek, RGD
      • Yves Lussier, SNOMED
    • Media:PhenoAgenda.doc
  • Stanford/Mayo/Berkeley Meetings
    • Nov. 21, 10am-3pm, Stanford; Nov. 22, 10am-3pm, Berkeley
    • Attending
      • From Stanford: Mark, Daniel, Archana, Lynn, Nigam
      • From Berkeley: Suzi, Chris, Sima, Shu, Nomi
      • From Mayo: Deepak, Harold, Jim
  • Forbes Dewey Meeting
    • Late October, MIT
    • Michael Ashburner, chair
    • Goal to see if anonymous foundation would pay for ontology content unification, standards, collaboration, etc.
  • Genome Informatics Meeting
    • Oct. 28-Nov. 1, CSHL
    • Suzi will gave presentation on cBio.
    • Birds of a feather sessions, one on ontology.
  • 1st International Annual Conference, Brazilian Association for Bioinformatics and Computational Biology, Caxambu, Brazil
    • October, 2006
    • Michael Ashburner, Keynote.
  • Applied Biosystems Inc., Science Meeting, Asilomar
    • September 2005
    • Michael Ashburner, Keynote.
  • MGED8, Bergen
    • September, 2005
    • Michael Ashburner, Keynote
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