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• Mv:Annotations
  #REDIRECT [[PATO:Annotations]]
  30 bytes (3 words) - 15:11, 15 December 2008

Page text matches

• OBD:Data Download
  * All annotations in OBD-Phenotype subset * All annotations to entities in OMIM IDspace
  850 bytes (126 words) - 14:34, 5 March 2008
• OBD:Similarity Statistics
  ...pabilities for computing the similarity between entities based on ontology annotations. OBD is flexible with respect to what kind of annotations and ontologies are used. For example:
  1 KB (196 words) - 13:00, 9 October 2008
• Mv:Annotations
  #REDIRECT [[PATO:Annotations]]
  30 bytes (3 words) - 15:11, 15 December 2008
• Degrees of Annotation
  ...ssemblies and compute pipelines (the results of which are sometimes called annotations, although the word is typically only used for human-curated data). As well
  2 KB (318 words) - 16:15, 15 May 2006
• Populating OBS database
  ...y the OBA/OBR workflow. It contains the concepts and terms used for direct annotations as well as the relations between concepts used during the semantic expansio
  1 KB (162 words) - 10:27, 18 September 2009
• Annotator R Client
  conceptNodes <- getNodeSet(x,"/success/data/annotatorResultBean/annotations/annotationBean/concept") resultNodes <- getNodeSet(x, "/success/data/annotatorResultBean/annotations/annotationBean/context")
  3 KB (279 words) - 10:41, 19 December 2013
• Customizing metadata
  * add new types of annotations
  1 KB (172 words) - 10:53, 17 October 2008
• SO:Main Page
  The Sequence Ontology: A tool for the unification of genome annotations. <BR>Eilbeck K., Lewis S.E., Mungall C.J., Yandell M., Stein L., Durbin R.,
  1 KB (219 words) - 18:55, 25 January 2007
• Ontology Recommender Client Examples
  '/success/data/annotatorResultBean/annotations/annotationBean/concept'); '/success/data/annotatorResultBean/annotations/annotationBean/context');
  3 KB (415 words) - 09:00, 15 September 2011
• Ontology Metadata Proposal (from OBI)
  '''Minimal requirement for term annotations in the CTO (metadata)'''
  2 KB (279 words) - 08:35, 15 March 2007
• Ontology Metadata Policy (from OBI)
  '''Minimal requirement for term annotations in the CTO (metadata)'''
  2 KB (285 words) - 11:58, 6 July 2007
• Ontology Recommender Web service
  ''To automatically recommend an ontology to use for semantic annotations'' ...tic annotation based approach and scores the ontologies according to those annotations. The recommender service uses the [[Annotator Web service]] . The prototype
  4 KB (489 words) - 13:28, 12 September 2011
• Annotator Optimizing and Troublehooting
  ...) of full page text articles, for which you wish to retrieve and parse the annotations. Assuming it takes about 20 second to parse and organize the response for e ...r BioPortal users. If the constraints suggested by this article mean your annotations will take too long, then you will need to set up a BioPortal Virtual Applia
  8 KB (1,421 words) - 21:15, 7 February 2017
• BioPortal FAQ
  ...rge repository of biomedical ontologies, terminologies, and ontology-based annotations. BioPortal is available at: http://bioportal.bioontology.org/. All content ...ab to search for term annotations or from the Resource Index tab to browse annotations for an individual term. This tool enables researchers to search for biomedi
  11 KB (1,718 words) - 18:15, 7 June 2022
• Resource Index
  ...iption) an annotation has been produced. This information is used to score annotations.
  5 KB (669 words) - 19:16, 8 April 2013
• SO:gene
  ...wn to a location on sequence, and be able to reason over the parts of gene annotations. To define the term gene in SO, we asked several questions. What is the ext
  3 KB (512 words) - 09:56, 10 August 2006
• Resource Index REST Web Service User Guide
  The Resource index API is based on the web service that returns annotations from the Resource Index (called via a REST post). Additionally some simplif * To retrieve "annotations" either per element or per concept(s) : http://rest.bioontology.org/resourc
  38 KB (4,789 words) - 16:43, 7 November 2014
• NCBO Annotator community
  ...ation created in Laboratree would also have corresponding ontology concept annotations. Researchers working on [http://rctbank.ucsf.edu/ Trialbank] create annotations for HIV/AIDS clinical trials in order to provide a Web application for visu
  6 KB (751 words) - 16:54, 18 August 2010
• Implementation Details
  The properties that link the annotations and the objects that they annotate: ...roperty(Names.ANNOTATES_BY_VIRTUAL_ID_PROPERTY); // property that links an annotations to the virtual id of an ontology ora conccept that it annotates
  15 KB (1,782 words) - 10:55, 17 October 2008
• Workshop Agenda
  ...-4pm</b> Possible future directions (formal relation ontologies, composed annotations, image annotation with ontologies) <b>[Stanford]</b>
  2 KB (284 words) - 15:04, 1 December 2014

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